Tutorial Contents
ΒΆ
Intro
A brief note on conventions
Create a
BedTool
Intersections
Saving the results
Default arguments
Chaining methods together (pipe)
Operator overloading
Intervals
Common
Interval
attributes
Indexing into
Interval
objects
Fields
BED is 0-based, others are 1-based
Worked example
GFF features have access to attributes
Filtering
Fast filtering functions in Cython
Each
Using the history and tags
Deleting temp files specific to a single
BedTool
Related Topics
Documentation overview
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